Bobby Bonilla baseball cards available from Baseball Card Stars. Ordering Information
| Year | Brand | Num. | Insert / Subset | Price | Qty. |
| 1987 | Topps | 184 | - | .50 | 3 |
| 1988 | Donruss | 238 | - | .50 | 8 |
| 1988 | Fleer Baseball All Stars | 3 | - | .50 | 1 |
| 1988 | Score | 116 | - | .50 | 1 |
| 1988 | Topps | 681 | - | .50 | 2 |
| 1989 | Bowman | 169 | - | .50 | 2 |
| 1989 | Donruss | 151 | - | .50 | 1 |
| 1989 | Donruss | 2 | Diamond Kings | .50 | 2 |
| 1989 | Fleer | 203 | - | .50 | 1 |
| 1989 | Score | 195 | - | .50 | 1 |
| 1989 | Sport Flix | 25 | - | 1.00 | 1 |
| 1989 | Topps | 388 | NL All-Stars | .50 | 2 |
| 1989 | Topps Glossy All-Stars | 15 | - | .50 | 1 |
| 1989 | Upper Deck | 578 | - | .50 | 1 |
| 1990 | Donruss | 290 | - | .50 | 2 |
| 1990 | Score | 170 | - | .50 | 1 |
| 1990 | Upper Deck | 16 | Pittsburgh Pirates Checklist | .50 | 1 |
| 1990 | Upper Deck | 366 | - | .50 | 1 |
| 1991 | Fleer | 34 | - | .50 | 3 |
| 1991 | Score | 315 | - | .50 | 3 |
| 1991 | Score | 402 | Master Blaster | .50 | 1 |
| 1991 | Score | 670 | Score All Star Team | .50 | 1 |
| 1991 | Topps | 403 | NL All-Stars | .50 | 2 |
| 1992 | Pinnacle | 395 | - | .50 | 1 |
| 1992 | Stadium Club | 608 | Member's Choice | .50 | 1 |
| 1992 | Stadium Club | 780 | - | .50 | 2 |
| 1992 | Upper Deck | 225 | - | .50 | 1 |
| 1993 | Donruss Triple Play | 173 | - | .50 | 1 |
| 1993 | Studio | 16 | - | .50 | 1 |
| 1993 | Topps | 52 | - | .50 | 1 |
| 1994 | Donruss | 347 | - | .50 | 1 |
| 1994 | Pinnacle | 33 | - | .50 | 1 |
| 1994 | Topps Finest | 234 | - | 1.00 | 1 |
| 1994 | UD Collector's Choice | 58 | - | .50 | 1 |
| 1994 | Ultra | 528 | - | .50 | 1 |
| 1994 | Upper Deck | 344 | - | .50 | 1 |
| 1995 | Fleer Emotion | 158 | - | 1.00 | 1 |
| 1995 | Fleer Flair | 169 | - | .50 | 1 |
| 1995 | Score Select | 47 | - | .50 | 1 |
| 1995 | Score Select Certified | 34 | - | .50 | 1 |
| 1995 | Stadium Club | 504 | Extreme Corps | .50 | 2 |
| 1995 | UD Collector's Choice | 320 | - | .50 | 1 |
| 1996 | Emotion-XL | 3 | - | .50 | 1 |
| 1996 | Leaf | 78 | - | .50 | 1 |
| 1996 | Leaf Preferred | 34 | Leaf Preferred Steel | 1.00 | 2 |
| 1996 | Pinnacle Summit | 52 | - | .50 | 1 |
| 1996 | Score | 167 | - | .50 | 1 |
| 1996 | Sport Flix | 47 | - | .50 | 1 |
| 1996 | Stadium Club | 146 | - | .50 | 1 |
| 1996 | Topps | 329 | - | .50 | 1 |
| 1996 | Upper Deck | 279 | - | .50 | 1 |
| 1997 | Donruss | 102 | - | .50 | 1 |
| 1997 | Donruss Elite | 45 | - | .50 | 1 |
| 1997 | Donruss Preferred | 27 | - | .50 | 1 |
| 1997 | Leaf | 262 | - | .50 | 1 |
| 1997 | Pinnacle | 28 | - | .50 | 1 |
| 1997 | Pinnacle X Press | 107 | - | .50 | 1 |
| 1997 | Score | 123 | - | .50 | 1 |
| 1997 | Score Select | 65 | - | .50 | 2 |
| 1997 | Ultra | 360 | - | .50 | 1 |
| 1998 | Donruss | 142 | - | .50 | 1 |
| 1998 | Donruss Preferred | 101 | - | .50 | 1 |
| 1998 | Fleer Tradition | 458 | - | .50 | 1 |
| 1998 | Leaf | 3 | - | .50 | 5 |
| 1998 | Pacific Crown Collection | 15 | Latinos in the Major Leagues | 1.50 | 1 |
| 1998 | Pacific Crown Collection | 296 | - | .50 | 1 |
| 1998 | Pacific Paramount | 158 | - | .50 | 1 |
| 1998 | Pinnacle | 65 | - | .50 | 1 |
| 1998 | Pinnacle Inside | 73 | - | .50 | 1 |
| 1998 | Pinnacle Performers | 87 | - | .50 | 3 |
| 1998 | Pinnacle Plus | 150 | - | .50 | 3 |
| 1998 | Score Rookie Traded | RT97 | - | .50 | 3 |
| 1998 | Topps | 356 | - | .50 | 2 |
| 1998 | UD Collector's Choice | 98 | - | .50 | 1 |
| 1998 | Ultra | 298 | - | .50 | 1 |
| 1998 | Upper Deck | 375 | - | .50 | 1 |
| 1999 | Fleer Metal Universe | 155 | - | .50 | 1 |
| 1999 | Fleer Tradition | 358 | - | .50 | 1 |
| 1999 | Pacific Crown Collection | 138 | - | .50 | 1 |
| 1999 | Pacific Prism | 92 | - | .50 | 1 |
| 1999 | Stadium Club | 324 | Transactions | .50 | 2 |
| 1999 | Topps | 282 | - | .50 | 5 |
| 1999 | Upper Deck | 119 | Dodgers | .50 | 1 |
| 1999 | Upper Deck | 431 | Mets | .50 | 3 |
| 2001 | Topps | 709 | - | .50 | 5 |
| 2001 | Topps Traded | T115 | 1986 Rookie Card Reprint | .50 | 4 |
| 2001 | Topps Traded Chrome | T115 | 1986 Rookie Card Reprint | 1.00 | 1 |
| 2002 | Topps | 72 | - | .50 | 7 |
| 2002 | Topps Heritage | 46 | - | .50 | 2 |
| 2002 | Upper Deck | 295 | - | .50 | 2 |
| 2004 | Topps All-Time Fan Favorites | 92 | - | 1.00 | 2 |